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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858097.1_cds_XP_016513732.1_26248
CDS Infomation

[gene=LOC107830624] [db_xref=GeneID:107830624] [protein=protein argonaute 16-like isoform X2] [protein_id=XP_016513732.1] [location=complement(join(35676..35700,38898..38963,39053..39183,39273..39410,39503..39615,39697..39862,39941..40054,40393..40455,40540..40647,40720..40836,40934..41105,41188..41285,41365..41462,41542..41678,41755..41970,42064..42269,42356..42571))] [gbkey=CDS]
Sequence

ATGGAAGGAAGTGAGGGAAGACAGAGTTTTTGCCCACCTGTGGCAGTAGCACCACCAGTT
ATAGCGTTGGACGCGGAGCCAGAGAGAGTTGATCAGCCCAAGCGTACTGTAATGTCGAGG
CCTGGGAATGGAACATCTGGACGAGGGATTACTTTGCTCGCAAACCACTTAAAAGTTTCT
GTCAAATGTCCTGATGAAATATTTTACCAATACAGTGTCTCTATAACTTGTGATGAAAAG
AGGGATGTTAACATCAAGCGGATTGGAAGAAAAATCATAGATAAAATTCACGAAACATAC
TCATCTGAATTTGCGGGAAAGAAATTTGTTTACGATGGAGAGAAGAGTTTGTACACAGTG
GGACCTCTGCCACGCAACAAAGTGGAATTCACGGTGGTTGTTGAAGAGTCTAGTGCAAAG
CATGCTAGTGAGAGCCCCTCAGATAATGGAAGCAACAATCACTCTAGTAAAAGATCTAAG
CGTTCTCTTCATTCAAAAGCTTTCCGGGTGGAGATCAACTTTGCAGCTAAAATACCATTA
AAGTCCATTTCTCTTGCCCTTCAAGGAGCTGATGCGGAAAATGTTCAAGATGCATTGAGG
GTTCTGGACATTATATTGCGACAACAAGCTGCTAATAGAGGATGCCTCTTGGTTAGACAG
TCATTTTTTCATGACGACTCAAGGAACTTCACAGATGTTGGAGGGGGTGTAATGGGTTGT
AAGGGGCTCCATTCCAGCTTTCGTCCAACCCTTGATGGATTGACCTTGAACATGGATGTG
TCTACAACTATGATCCTATCACCTGGACCTGTAATCGACTTTTTACTCGCTAACCAGAAT
GTAAAGGAGCCTCGTTATATTGATTGGGCAAGAGCAAAAAGAATGTTGAAGAATCTGAGA
GTTAAAGCTAAGCACAGCAACAAGGAATTCAAAATCATCGGTCTGAGTGAGAGACCTTGC
AATCAACAGTTATTTTCTATGAAAGTAAAAAATGGTGATGGCCTAGATAATGGAGGAGAG
ACCATAGAGATAACTGTTTATGAGTACTTCACTAAACACCGTAACATAGAACTTTCAAAC
TCTGCTTATATGCCATGCCTGGATGTCGGAAAACCGAAACGACCAAACTATCTGCCACTG
GAGCTGTGTTATTTGGTCTCCCTTCAAAGATACACAAAAGTGTTATCATCAGTGCAGCGG
GCATCTTTAGTTGAAAAATCAAGGCAGAAGCCTCGAGAACGAATTAAAGTTATAACAGAT
GCTGTCAGGGACTACAGCTATGATGATGATCCCCTTCTTGCCACTTGTGGAGTCTCGATA
GAAAAGCAGCTCATTCAAATTAACGGCAGGGTCCTTGAGGCTCCAAAGTTGAAGGCTGGT
AATGGCGAAGAGGTCGTTCCCCGCAACGGCCGATGGAATTTTAATAACAAGCATCTTTTG
ACCCCTGCACGAATTGAACGCTGGGCAGTGGTCAACTTCTCTGCCCGTTGTGATACAAGT
CACCTTTCGAGGGAGCTTATTAGTTGTGGAAGGACCAAAGGCATTCATTTTGAACGCCCA
CATACACTCATTGAGGAAGATCCCCAGAATAGGCGAGCTGGGCCTGTAATTCGAGTAGAA
AAGATGTTCGAAGAGATAATAGCTAGACTTCCTGGCCCTCCTGACTTTCTTCTCTGTGTC
TTGCCAGAGCGAAAAAACTCAGAGATATATGGACCTTGGAAGAAAAAAAGCTTGACTGAC
TTGGGAATTGTTACTCAATGTATCTCTCCGTTAAAGATCAATGATCAATATCTAACGAAT
GTGCTTCTCAAAATTAATGCAAAGCTTGGAGGGACCAATTCATTGTTGGCTATGGAACAT
GCATCTTATCTGCCGCATATTCAGGAAACTCCAACAATGATTCTGGGCATGGATGTCTCT
CATGGATCTCCTGGTCAATCAGATATTCCATCAATTGCTGCGGTTGTGGGATCCTTATAT
TGGCCATTAATATCCAAGTACAGGGCAGTTGTCCGTAGTCAATCTCCAAAGTTAGAAATT
ATAGAATCCTTATACAAGCCTTTACCAAATGGAGACGATGAAGGAATCATGGGAGAACTT
CTTCTGGACTTCTATAGGACATGTAACGGCCATAAACCAGCTCAAATTATTGTCTTCAGA
ATATTGCAATATATGTGGCTGTGA

Peptide Sequence

PEP ID

XP_016513732.1
PEP Infomation

PREDICTED: protein argonaute 16-like isoform X2 [Nicotiana tabacum]
Sequence

MEGSEGRQSFCPPVAVAPPVIALDAEPERVDQPKRTVMSRPGNGTSGRGITLLANHLKVS
VKCPDEIFYQYSVSITCDEKRDVNIKRIGRKIIDKIHETYSSEFAGKKFVYDGEKSLYTV
GPLPRNKVEFTVVVEESSAKHASESPSDNGSNNHSSKRSKRSLHSKAFRVEINFAAKIPL
KSISLALQGADAENVQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFTDVGGGVMGC
KGLHSSFRPTLDGLTLNMDVSTTMILSPGPVIDFLLANQNVKEPRYIDWARAKRMLKNLR
VKAKHSNKEFKIIGLSERPCNQQLFSMKVKNGDGLDNGGETIEITVYEYFTKHRNIELSN
SAYMPCLDVGKPKRPNYLPLELCYLVSLQRYTKVLSSVQRASLVEKSRQKPRERIKVITD
AVRDYSYDDDPLLATCGVSIEKQLIQINGRVLEAPKLKAGNGEEVVPRNGRWNFNNKHLL
TPARIERWAVVNFSARCDTSHLSRELISCGRTKGIHFERPHTLIEEDPQNRRAGPVIRVE
KMFEEIIARLPGPPDFLLCVLPERKNSEIYGPWKKKSLTDLGIVTQCISPLKINDQYLTN
VLLKINAKLGGTNSLLAMEHASYLPHIQETPTMILGMDVSHGSPGQSDIPSIAAVVGSLY
WPLISKYRAVVRSQSPKLEIIESLYKPLPNGDDEGIMGELLLDFYRTCNGHKPAQIIVFR
ILQYMWL

Transcript Sequence

Gene sequence data has not been registered.